BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H11LP1|AL426610
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1509 1712 0.0
>3x_Contig1509
Length = 8584
Score = 1712 bits (863), Expect = 0.0
Identities = 873/876 (99%), Gaps = 2/876 (0%)
Strand = Plus / Minus
Query: 1 gacgaaccatataccaactttgagtttttatttttatttggcttttggtttctagcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2696 gacgaaccatataccaactttgagtttttatttttatttggcttttggtttctagcattt 2637
Query: 61 agcatcagagagcaaacttggtagatacaatcttttcaataaaaatgtctaacccattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2636 agcatcagagagcaaacttggtagatacaatcttttcaataaaaatgtctaacccattcc 2577
Query: 121 aaaatattggtagaaactttgcgtatttgtgtattggtcttactgcttctatagttatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2576 aaaatattggtagaaactttgcgtatttgtgtattggtcttactgcttctatagttatcg 2517
Query: 181 tcaagaccgttgtacgtgatgctaaagtttccaagttcgacccgcagaatttgagtgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2516 tcaagaccgttgtacgtgatgctaaagtttccaagttcgacccgcagaatttgagtgggg 2457
Query: 241 atgagaagaaagatgcagattcttattacgcaaaccctgctctggtgaaaccaggagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2456 atgagaagaaagatgcagattcttattacgcaaaccctgctctggtgaaaccagg--ttc 2399
Query: 301 cccatgaagaaagaagaagaaaccacggaaataaaaaggaaaagtgaatttgaaggggcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2398 cccatgaagaaagaagaagaaaccacggaaataaaaaggaaaagtgaatttgaaggggcc 2339
Query: 361 ggtttatcctacaatacaagaaagcgtggtgatagattagggttcttggatagaagaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2338 ggtttatcctacaatacaagaaagcgtggtgatagattagggttcttggatagaagaagt 2279
Query: 421 aacgaatgattaataagcaagattttaattctgcaaggcaatacacgaacctacccatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2278 aacgaatgattaataagcaagattttaattctgcaaggcaatacacgaacctacccatca 2219
Query: 481 cacttatttattaacaacacacacaaacactgcaatgactaaatgaaacaatctagaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2218 cacttatttattaacaacacacacaaacactgcaatgactaaatgaaacaatctagaaat 2159
Query: 541 atatcctgttctttactgaaagattcctcatgtaaatagtgcttaaagaaagtgaaataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 atatcctgttctttactgaaagattcctcatgtaaatagtgcttaaagaaagtgaaataa 2099
Query: 601 aatacaaactattgatatcaatattataatavagtttagctaggtaagaaaagataggcc 660
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2098 aatacaaactattgatatcaatattataataaagtttagctaggtaagaaaagataggcc 2039
Query: 661 gagcacataagaaagatacggatttttttgattgagaaaccacgcagtcacaccggttga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2038 gagcacataagaaagatacggatttttttgattgagaaaccacgcagtcacaccggttga 1979
Query: 721 aattgaggaatataaaacaaacaacaaatgaactgaacttctaggatgtctaacgaatag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1978 aattgaggaatataaaacaaacaacaaatgaactgaacttctaggatgtctaacgaatag 1919
Query: 781 attcgaaagcagagacaatccgttcgttattaaggaagactttataatttctcagtccag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1918 attcgaaagcagagacaatccgttcgttattaaggaagactttataatttctcagtccag 1859
Query: 841 taatttcaagaacgcaatatcttatttggattcttc 876
||||||||||||||||||||||||||||||||||||
Sbjct: 1858 taatttcaagaacgcaatatcttatttggattcttc 1823
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9264
Number of Sequences: 1807
Number of extensions: 9264
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)